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Access and retrieve biology preprints from bioRxiv by category and date range, including paper metadata without needing authentication.

开发与 DevOps

许可证:MIT-0

MIT-0 ·免费使用、修改和重新分发。无需归因。

版本:v1.0.0

统计:⭐ 0 · 138 · 0 current installs · 0 all-time installs

0

安装量(当前) 0

🛡 VirusTotal :良性 · OpenClaw :良性

Package:aquaskyline/biorxiv-openclaw-skill

安全扫描(ClawHub)

  • VirusTotal :良性
  • OpenClaw :良性

OpenClaw 评估

The skill's code and instructions are consistent with its stated purpose (fetching bioRxiv preprints via the public API), it requires no credentials or installs, and contains no obvious data-exfiltration or privilege-escalation behavior.

综合结论

This skill appears coherent and low-risk: it only makes HTTPS requests to the public bioRxiv API and prints results, and it asks for no credentials or installs. Before installing: (1) Review the minor functional mismatches (the script defaults start_date to 2020-01-01 which may return a very large result set; if you expect 'last N days' behavior, the script may not do that), (2) Verify the collections/category names you need—the code maps hyph…

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请把本段交给龙虾中文库(龙虾 AI)执行:为本机安装 OpenClaw 技能「bioRxiv access using API with support of time period and category」。简介:Access and retrieve biology preprints from bioRxiv by category and date range, …。
请 fetch 以下地址读取 SKILL.md 并按文档完成安装:https://raw.githubusercontent.com/openclaw/skills/refs/heads/main/skills/aquaskyline/biorxiv-openclaw-skill/SKILL.md
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SKILL.md

打开原始 SKILL.md(GitHub raw)

---
name: biorxiv
version: 1.1.0
description: Access bioRxiv preprint repository for biology preprints. Use for: (1) Fetching recent preprints from specific categories like bioinformatics, genomics, molecular-biology, etc., (2) Getting papers by date range, (3) Listing available subject collections, (4) Retrieving paper metadata including titles, authors, DOIs, dates, and categories. No authentication required.
---

# bioRxiv Skill

This skill provides access to the bioRxiv preprint repository using the official bioRxiv API.

## When to Use

- User asks for recent biology preprints
- User wants papers from specific bioRxiv categories (bioinformatics, genomics, etc.)
- User needs paper metadata (title, authors, DOI, date, category)
- User asks for preprints from a specific date range

## Quick Start

### List Available Collections

```bash
python scripts/biorxiv.py --list
```

### Fetch Recent Papers

```bash
# Default: bioinformatics papers
python scripts/biorxiv.py --collection bioinformatics

# Other collections
python scripts/biorxiv.py --collection genomics
python scripts/biorxiv.py --collection neuroscience
python scripts/biorxiv.py --collection microbiology

# Specific date range
python scripts/biorxiv.py --collection bioinformatics --start 2026-03-01 --end 2026-03-09

# Limit results
python scripts/biorxiv.py --collection bioinformatics --limit 10
```

### Output as JSON

```bash
python scripts/biorxiv.py --collection bioinformatics --json
```

## Available Collections

- bioinformatics
- genomics
- molecular-biology
- cell-biology
- genetics
- evolutionary-biology
- ecology
- neuroscience
- plant-biology
- microbiology
- immunology
- cancer-biology
- biochemistry
- biophysics
- structural-biology
- systems-biology
- synthetic-biology
- developmental-biology
- computational-biology

## API Notes

### Official bioRxiv API
- **Base URL:** `https://api.biorxiv.org/details/biorxiv/{start_date}/{end_date}/{cursor}`
- **No authentication required**
- Returns up to 100 papers per call
- Supports category filtering via query parameter

### API Endpoints
- `/details/biorxiv/[start]/[end]/[cursor]` — Paper metadata
- `/pub/[start]/[end]/[cursor]` — Published articles only

## Usage Patterns

### Summarize Recent Papers

1. Fetch papers from desired collection
2. Parse titles and abstracts
3. Group by theme if multiple
4. Provide concise summary

### Find Papers by Topic

1. Search across multiple relevant collections
2. Filter by keywords in titles
3. Return most relevant results